Mooney Publications

Recent Publications

2013

Matthew J Rardin, John C Newman... Bradford W Gibson "Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways." Proc. Natl. Acad. Sci. U.S.A. 110:16 6601-6606

Tobias Wittkop, Emily Teravest... Sean D Mooney "STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation." BMC Bioinformatics 14:1 53

Predrag Radivojac, Wyatt T Clark... Avik "A large-scale evaluation of computational protein function prediction." Nat. Methods 10:3 221-7

2012

Ari E Berman, William K Barnett... Sean D Mooney "Collaborative software for traditional and translational research." Hum. Genomics 6:1 21

John P Miller, Bridget E Yates... Robert E Hughes "A Genome-Scale RNA-Interference Screen Identifies RRAS Signaling as a Pathologic Feature of Huntington's Disease." PLoS Genet. 8:11 e1003042

Theodore W Peters, Matthew J Rardin... Robert E Hughes "Tor1 regulates protein solubility in Saccharomyces cerevisiae." Mol. Biol. Cell 23:24 4679-88

Bryony A Thompson, Marc S Greenblatt... Sean V Tavtigian "Calibration of multiple in silico tools for predicting pathogenicity of mismatch repair gene missense substitutions." Hum. Mutat. 34:1 255-65

Gregory J Tranah, Michael A Nalls... Kristine Yaffe "Mitochondrial DNA Sequence Variation Associated with Dementia and Cognitive Function in the Elderly." Journal of Alzheimer's disease : JAD 32:2 357-372

Mahru C An, Ningzhe Zhang... Lisa M Ellerby "Genetic Correction of Huntington's Disease Phenotypes in Induced Pluripotent Stem Cells." Cell stem cell 11:2 253-63

Gregory J Tranah, Ernest T Lam... "Mitochondrial DNA sequence variation is associated with free-living activity energy expenditure in the elderly." Biochimica et biophysica acta 1817:9 1691-1700

Bryan A Haines, Darcy A Davis... David A Greenberg "Comparative protein interactomics of neuroglobin and myoglobin." Journal of neurochemistry 123:1 192-8

Tobias Wittkop, Ari E Berman... Sean D Mooney "DEFOG: discrete enrichment of functionally organized genes." Integrative biology : quantitative biosciences from nano to macro 4:7 795-804

Yiqiang Zhao, Sean D Mooney... Sean D Mooney "Functional organization and its implication in evolution of the human protein-protein interaction network." BMC genomics 13:1 150

2011

Yiqiang Zhao, Wyatt T Clark... Sean D Mooney "Prediction of Functional Regulatory SNPs in Monogenic and Complex Disease." Human mutation 32:10 1183-90

Jing-Yuan Liu, Sean D Mooney... Sean D Mooney "Characterization of ligand type of estrogen receptor by MD simulation and mm-PBSA free energy analysis." International journal of biochemistry and molecular biology 2:2 190-198

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